I understand how that could work for henotheists of Fronela, Ralios and Kethaela (especially if treating Arkati cults as Rune cults and not some philosophy schools or cabals teaching sorcery), but that feels kind of wrong for "true" Western societies. Both Rokari and Hrestoli as far as I remember forbid the veneration of "pagan gods", and Rokari forbid even the veneration of Ascended Masters, which means that for Seshnela you wouldn't even be able to disguise a Rune cult as a saint's cult, and commoners will have to do only with Spirit magic.
Also, as Joerg said,